Class: SegmentationIntersectionTool
Abstract class for tools which create and display annotations on the cornerstone3D canvas. In addition, it provides a base class for segmentation tools that require drawing an annotation before running the segmentation strategy for instance threshold segmentation based on an area and a threshold. Annotation tools make use of drawing utilities to draw SVG elements on the viewport.
To create a new annotation tool, derive from this class and implement the abstract methods.
Extends
Constructors
new SegmentationIntersectionTool()
new SegmentationIntersectionTool(
toolProps,defaultToolProps):SegmentationIntersectionTool
Parameters
• toolProps: PublicToolProps = {}
• defaultToolProps: SharedToolProp = ...
Returns
Overrides
AnnotationDisplayTool.constructor
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:27
Properties
configuration
configuration:
Record<string,any>
Inherited from
AnnotationDisplayTool.configuration
Defined in
tools/src/tools/base/BaseTool.ts:19
memo
protectedmemo:Memo
A memo recording the starting state of a tool. This will be updated as changes are made, and reflects the fact that a memo has been created.
Inherited from
Defined in
tools/src/tools/base/BaseTool.ts:28
mode
mode:
ToolModes
Tool Mode - Active/Passive/Enabled/Disabled/
Inherited from
Defined in
tools/src/tools/base/BaseTool.ts:23
supportedInteractionTypes
supportedInteractionTypes:
InteractionTypes[]
Supported Interaction Types - currently only Mouse
Inherited from
AnnotationDisplayTool.supportedInteractionTypes
Defined in
tools/src/tools/base/BaseTool.ts:17
toolGroupId
toolGroupId:
string
ToolGroup ID the tool instance belongs to
Inherited from
AnnotationDisplayTool.toolGroupId
Defined in
tools/src/tools/base/BaseTool.ts:21
defaults
staticdefaults:object
Has the defaults associated with the base tool.
configuration
configuration:
object
configuration.activeStrategy
activeStrategy:
any=undefined
configuration.defaultStrategy
defaultStrategy:
any=undefined
configuration.strategies
strategies:
object={}
configuration.strategyOptions
strategyOptions:
object={}
Inherited from
AnnotationDisplayTool.defaults
Defined in
tools/src/tools/base/BaseTool.ts:33
toolName
statictoolName:any
Overrides
AnnotationDisplayTool.toolName
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:25
Accessors
toolName
gettoolName():string
Newer method for getting the tool name as a property
Returns
string
Inherited from
AnnotationDisplayTool.toolName
Defined in
tools/src/tools/base/BaseTool.ts:82
Methods
_init()
_init():
void
Initialize the annotation data and calculates surface intersections
Returns
void
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:42
applyActiveStrategy()
applyActiveStrategy(
enabledElement,operationData):any
Applies the active strategy function to the enabled element with the specified operation data.
Parameters
• enabledElement: IEnabledElement
The element that is being operated on.
• operationData: unknown
The data that needs to be passed to the strategy.
Returns
any
The result of the strategy.
Inherited from
AnnotationDisplayTool.applyActiveStrategy
Defined in
tools/src/tools/base/BaseTool.ts:102
applyActiveStrategyCallback()
applyActiveStrategyCallback(
enabledElement,operationData,callbackType, ...extraArgs):any
Applies the active strategy, with a given event type being applied. The event type function is found by indexing it on the active strategy function.
Parameters
• enabledElement: IEnabledElement
The element that is being operated on.
• operationData: unknown
The data that needs to be passed to the strategy.
• callbackType: string
the type of the callback
• ...extraArgs: any[]
Returns
any
The result of the strategy.
Inherited from
AnnotationDisplayTool.applyActiveStrategyCallback
Defined in
tools/src/tools/base/BaseTool.ts:126
createAnnotation()
protectedcreateAnnotation(evt):Annotation
Creates an annotation containing the basic data set.
Parameters
• evt: InteractionEventType
Returns
Inherited from
AnnotationDisplayTool.createAnnotation
Defined in
tools/src/tools/base/AnnotationDisplayTool.ts:134
doneEditMemo()
doneEditMemo():
void
This clears and edit memo storage to allow for further history functions to be called. Calls the complete function if present, and pushes the memo to the history memo stack.
This should be called when a tool has finished making a change which should be separated from future/other changes in terms of the history. Usually that means on endCallback (mouse up), but some tools also make changes on the initial creation of an object or have alternate flows and the doneEditMemo has to be called on mouse down or other initiation events to ensure that new changes are correctly recorded.
If the tool has no end callback, then the doneEditMemo is called from the pre mouse down callback. See ZoomTool for an example of this usage.
Returns
void
Inherited from
AnnotationDisplayTool.doneEditMemo
Defined in
tools/src/tools/base/BaseTool.ts:305
filterInteractableAnnotationsForElement()
filterInteractableAnnotationsForElement(
element,annotations):Annotations
Given the element and annotations which is an array of annotation, it filters the annotations array to only include the annotation based on the viewportType. If the viewport is StackViewport, it filters based on the current imageId of the viewport, if the viewport is volumeViewport, it only returns those that are within the same slice as the current rendered slice in the volume viewport. imageId as the enabledElement.
Parameters
• element: HTMLDivElement
The HTML element
• annotations: Annotations
The annotations to filter (array of annotation)
Returns
The filtered annotations
Inherited from
AnnotationDisplayTool.filterInteractableAnnotationsForElement
Defined in
tools/src/tools/base/AnnotationDisplayTool.ts:63
getReferencedImageId()
protectedgetReferencedImageId(viewport,worldPos,viewPlaneNormal,viewUp?):string
Parameters
• viewport: Viewport
• worldPos: Point3
• viewPlaneNormal: Point3
• viewUp?: Point3
Returns
string
Inherited from
AnnotationDisplayTool.getReferencedImageId
Defined in
tools/src/tools/base/AnnotationDisplayTool.ts:184
getStyle()
getStyle(
property,specifications,annotation?):unknown
It takes the property (color, lineDash, etc.) and based on the state of the annotation (selected, highlighted etc.) it returns the appropriate value based on the central toolStyle settings for each level of specification.
Parameters
• property: string
The name of the style property to get.
• specifications: StyleSpecifier
• annotation?: Annotation
The annotation for the tool that is currently active.
Returns
unknown
The value of the property.
Inherited from
AnnotationDisplayTool.getStyle
Defined in
tools/src/tools/base/AnnotationDisplayTool.ts:221
getTargetId()
protectedgetTargetId(viewport):string
Get the target Id for the viewport which will be used to store the cached statistics scoped to that target in the annotations. For StackViewport, targetId is the viewportId, but for the volume viewport, the targetId will be grabbed from the volumeId if particularly specified in the tool configuration, or if not, the first actorUID in the viewport.
Parameters
• viewport: Viewport
viewport to get the targetId for
Returns
string
targetId
Inherited from
AnnotationDisplayTool.getTargetId
Defined in
tools/src/tools/base/BaseTool.ts:238
getTargetImageData()
protectedgetTargetImageData(targetId):IImageData|CPUIImageData
Get the image that is displayed for the targetId in the cachedStats which can be
imageId:<imageId>volumeId:<volumeId>videoId:<basePathForVideo>/frames/<frameSpecifier>
Parameters
• targetId: string
annotation targetId stored in the cached stats
Returns
IImageData | CPUIImageData
The image data for the target.
Inherited from
AnnotationDisplayTool.getTargetImageData
Defined in
tools/src/tools/base/BaseTool.ts:181
getToolName()
getToolName():
string
Returns the name of the tool
Returns
string
The name of the tool.
Inherited from
AnnotationDisplayTool.getToolName
Defined in
tools/src/tools/base/BaseTool.ts:90
onCameraModified()
onCameraModified(
evt):void
Parameters
• evt: CameraModifiedEvent
Returns
void
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:91
onImageSpacingCalibrated()
onImageSpacingCalibrated(
evt):void
On Image Calibration, take all the annotation from the AnnotationState manager, and invalidate them to force them to be re-rendered and their stats to be recalculated. Then use the old and new imageData (non-calibrated and calibrated) to calculate the new position for the annotations in the space of the new imageData.
Parameters
• evt: ImageSpacingCalibratedEvent
The calibration event
Returns
void
Inherited from
AnnotationDisplayTool.onImageSpacingCalibrated
Defined in
tools/src/tools/base/AnnotationDisplayTool.ts:88
onSetToolEnabled()
onSetToolEnabled():
void
Returns
void
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:87
redo()
redo():
void
Redo an action (undo the undo)
Returns
void
Inherited from
Defined in
tools/src/tools/base/BaseTool.ts:261
renderAnnotation()
renderAnnotation(
enabledElement,svgDrawingHelper):boolean
Renders the surface intersections
Parameters
• enabledElement: IEnabledElement
The Cornerstone's enabledElement.
• svgDrawingHelper: SVGDrawingHelper
The svgDrawingHelper providing the context for drawing.
Returns
boolean
Overrides
AnnotationDisplayTool.renderAnnotation
Defined in
tools/src/tools/SegmentationIntersectionTool.ts:101
setActiveStrategy()
setActiveStrategy(
strategyName):void
Sets the active strategy for a tool. Strategies are multiple implementations of tool behavior that can be switched by tool configuration.
Parameters
• strategyName: string
name of the strategy to be set as active
Returns
void
Inherited from
AnnotationDisplayTool.setActiveStrategy
Defined in
tools/src/tools/base/BaseTool.ts:167
setConfiguration()
setConfiguration(
newConfiguration):void
merges the new configuration with the tool configuration
Parameters
• newConfiguration: Record<string, any>
Returns
void
Inherited from
AnnotationDisplayTool.setConfiguration
Defined in
tools/src/tools/base/BaseTool.ts:153
undo()
undo():
void
Undoes an action
Returns
void
Inherited from
Defined in
tools/src/tools/base/BaseTool.ts:251
createZoomPanMemo()
staticcreateZoomPanMemo(viewport):object
Creates a zoom/pan memo that remembers the original zoom/pan position for the given viewport.
Parameters
• viewport: any
Returns
object
restoreMemo()
restoreMemo: () =>
void
Returns
void
Inherited from
AnnotationDisplayTool.createZoomPanMemo
Defined in
tools/src/tools/base/BaseTool.ts:269
mergeDefaultProps()
staticmergeDefaultProps(defaultProps,additionalProps?):any
Does a deep merge of property options. Allows extending the default values for a child class.
Parameters
• defaultProps = {}
this is a base set of defaults to merge into
• additionalProps?: any
the additional properties to merge into the default props
Returns
any
defaultProps if additional props not defined, or a merge into a new object containing additionalProps adding onto and overriding defaultProps.
Inherited from
AnnotationDisplayTool.mergeDefaultProps